| Encyclopedia of Life | Open-access resource of detailed information about species of organisms. |
| Catalogue of Life | A meta-database of all species on earth |
ARABIDOPSIS |
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| The Arabidopsis thaliana Database (AtDB) Project provides genomic and related data about Arabidopsis. | |
BACTERIA |
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| SubtiWiki | Integrated database for the model bacterium Bacillus subtilis[4] |
FLIES |
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| FlyBase | FlyBase is a comprehensive database for information on the genetics and molecular biology of Drosophila. It includes data from the Drosophila Genome Projects and data curated from the literature. |
BIRDS |
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| Birds of the World | Online database of over 10,000 bird species globally. |
HUMANS |
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| Personal Genome Project | Human genomes of 100,000 volunteers from around the world |
LEGUME |
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| Legume Information System (LIS) | Genomic database for the legume family |
MOUSE |
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| Edinburgh Mouse Atlas | Mouse gene expression data |
MODEL ORGANISM DATABASE |
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| Model Organism Databases | A database of model organisms |
ORGANISMS |
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| Superfamily | Library of HMMs representing superfamilies and database of (superfamily and family) annotations for all completely sequenced organisms |
PARASITE |
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| Parasites - Centers for Disease Control & Prevention | Introduction to medically important parasites. |
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PATHOGEN |
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| PHI-base | Pathogen-host interaction database. It links gene information to phenotypic information from microbial pathogens on their hosts. Information is manually curated from peer reviewed literature. |
PRIMATE |
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| All the world's primates | All the World's Primates is the comprehensive and authoritative resource. |
PROKARYOTES |
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| EzTaxon-e | Database for the identification of prokaryotes based on 16S ribosomal RNA gene sequences |
RAT |
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| RGD Rat Genome Database | Genomic and phenotype data for Rattus norvegicus |
SACCHAROMYCES CERVISIAE |
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| Saccharomyces Genome Database | genome of the yeast model organism |
| SCPD | The Promoter Database of Saccharomyces cerevisiae. |
Schizosaccharomyces pombe |
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| Schizosaccharomyces pombe | manually curated phenotypic data for the yeast |
SOYBEAN |
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| SoyBase Database (SoyBase) | USDA soybean genetics and genomic database (Soybean) |
VIRUS |
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| Virus database on-line (ICTVdB) | ICTVdB provides access to the ICTV (International Committee on Taxonomy of Viruses), the Index Virum, a catalogue of all ICTV approved virus names, the universal virus database containg the descriptions of viruses and to an picture gallery of viruses. All databses have links to other prominent websites available around the world which are devoted to information about viruses, along with short, clear descriptions of each of them. |
WORM |
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| Caenorhabditis elegans | C elegans genome |
| Wormbase | Genome of the model organism Caenorhabditis elegans and WormBase ParaSite for parasitic species |
XENOPUS |
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| Xenbase | Genome of the model organism Xenopus tropicalis and Xenopus laevis |
YEAST |
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| PomBase | Manually curated phenotypic data for the yeast Schizosaccharomyces pombe |
ZEBRAFISH |
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| Zebrafish Information Network | Genome of this fish model organism |